/tools/SiamDiff
SiamDiff
DeepGraphLearning/SiamDiff
42 stars6 forksPythonAdded February 5, 2026
summary
SiamDiff is a codebase for a diffusion-based pre-training algorithm that enhances protein structure encoders. It improves performance on tasks such as protein-protein interaction prediction and function annotation by learning effective representations from protein sequences and structures.
description
Code for Pre-training Protein Encoder via Siamese Sequence-Structure Diffusion Trajectory Prediction (https://arxiv.org/abs/2301.12068)
topics
pre-trainingproteinprotein-protein-interactionprotein-representation-learning
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