/tools/otter-knowledge

otter-knowledge

IBM/otter-knowledge

62 stars7 forksPythonAdded February 8, 2026
summary

The Otter Knowledge repository enhances protein sequence and SMILES drug databases with a multimodal knowledge graph, improving predictions on drug-target binding affinity benchmarks. It provides pre-trained models and datasets for representation learning in drug discovery.

description

Knowledge-enhanced learned representation enriches protein sequence and SMILES drug databases with a large Knowledge Graph fused from different sources. This improves results on TDC drug target binding affinity prediction benchmarks.

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