/tools/phage-host-prediction
phage-host-prediction
bioinfodlsu/phage-host-prediction
summary
PHIEmbed is a tool designed for predicting phage-host interactions by utilizing protein language models to represent receptor-binding proteins. It improves upon traditional methods by automating feature extraction and enhancing prediction accuracy through the use of embeddings.
description
Published in PLOS ONE. Phage-host interaction prediction tool that uses protein language models to represent the receptor-binding proteins of phages. It presents improvements over using handcrafted sequence properties and eliminates the need to manually extract and select features from phage sequences
topics
bioinformaticsgenomicsphage-host-predictionproteinprotein-embeddingprotein-language-modelproteomicsrepresentation-learningtransfer-learningtransformermachine-learning
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