/tools/perses

perses

choderalab/perses

199 stars50 forksPythonWebsiteAdded February 4, 2026
summary

Perses is a software tool designed for conducting expanded ensemble simulations, allowing users to explore chemical and mutational spaces. It provides functionalities for molecular dynamics and free energy perturbation calculations, making it useful for researchers in computational chemistry.

description

Experiments with expanded ensembles to explore chemical space

topics

molecular-designpythonmolecular-dynamicsfree-energy-perturbationsimulationexpanded-ensemblesopenmmrelative-free-energy

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