/tools/PST

PST

BorgwardtLab/PST

46 stars3 forksPythonWebsiteAdded February 8, 2026
summary

The Protein Structure Transformer (PST) enhances pretrained protein language models by incorporating structural knowledge, allowing for the extraction of protein structure representations. It can be used for various protein function prediction tasks and is trained on datasets like AlphaFold SwissProt.

description

Protein Structure Transformer (PST): Endowing pretrained protein language models with structural knowledge

topics

evolutionary-scale-modelinggraph-transformerprotein-representation-learningprotein-structure

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