/tools/Phylogeny-MSA-Transformer
Phylogeny-MSA-Transformer
Bitbol-Lab/Phylogeny-MSA-Transformer
17 stars1 forksJupyter NotebookAdded February 8, 2026
summary
The Phylogeny-MSA-Transformer repository provides tools for training protein language models on multiple sequence alignments to learn phylogenetic relationships. It includes scripts and requirements for analyzing protein sequences and generating phylogenetic insights.
description
Supporting repository for "Protein language models trained on multiple sequence alignments learn phylogenetic relationships" (https://www.nature.com/articles/s41467-022-34032-y)
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